The detailed information of tRNA gene sequence


Sequence ID>WENV170219394
Genome IDCEPZ01061494
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1494
End posion on genome 1419
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tctttgataT
tRNA gene sequence 
GAGCCTGTGGCGTAGTCTGGTAGCGCACTGCCCTTACAAGGCAGGGGTCGGGAGTTCGAA
TCTCCCCGGGCTCATgc
Downstream region at tRNA end position 
cttttttata
Secondary structure (Cloverleaf model)
>WENV170219394	Val	TAC
                   T      ATgc cttttttata
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    C       T G C G       G G G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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