The detailed information of tRNA gene sequence


Sequence ID>WENV170219442
Genome IDCEPZ01064344
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1874
End posion on genome 1945
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtcaattag
tRNA gene sequence 
GCCCGCGTGGTGTAGCGGTTAGCATTCTACCCTGTCACGGTAGCGACCCGAGTTCGAGTC
TCGGCGTGGGCGtag
Downstream region at tRNA end position 
tcacttttgt
Secondary structure (Cloverleaf model)
>WENV170219442	Asp	GTC
                   g      Gtag tcacttttgt
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     G G C T C     A
      C G A        G      | | | | |     G
    G       T G T G       C C G A G     C
    G       + | | +                 T T
    T       G C A T
      T A          T     CGAC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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