The detailed information of tRNA gene sequence


Sequence ID>WENV170219539
Genome IDCEPZ01070473
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1248
End posion on genome 1173
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taccaactgt
tRNA gene sequence 
GCTCCTATCGTCTAGTCCGGCCAAGGATACTAGCCTTTCGAGCTAGGGACGGGGGTTCGA
ATCCCCCTGGGAGCACtt
Downstream region at tRNA end position 
ttatatatta
Secondary structure (Cloverleaf model)
>WENV170219539	Glu	TTC
                   t      ACtt ttatatatta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     G
  C         T C T G       G G G G G     C
  G         + | | +                 T T
  G         G G A T
    C C A A        A     GGAC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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