The detailed information of tRNA gene sequence


Sequence ID>WENV170219572
Genome IDCEPZ01071772
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 974
End posion on genome 898
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
accgctcaca
tRNA gene sequence 
GGGTAGTTGGTAGAATGGTTTAATACAGAGGTTTGCAAAACCTTATTTCGTCAGTTCGAT
TCTGACACTGCCCTCAA
Downstream region at tRNA end position 
cgttggtata
Secondary structure (Cloverleaf model)
>WENV170219572	Cys	GCA
                   a      TCAA cgttggtata
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     T - A          T T
                    T     C A G T C     A
      T A A        G      | | | | |     G
    G       G A T G       G T C A G     C
    G         | | |                 T T
    T       A T A C
      T T A        A     ATTTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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