The detailed information of tRNA gene sequence


Sequence ID>WENV170219583
Genome IDCEPZ01071958
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 15480
End posion on genome 15410
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gagaggttat
tRNA gene sequence 
GCGCGGATAGCATAGTGGTTATGCACTCGCCTGCAGAGCGAGTTACCTGGGTTCGATTCC
CGGTCCGCGCTtga
Downstream region at tRNA end position 
tacttttagt
Secondary structure (Cloverleaf model)
>WENV170219583	Cys	GCA
                   t      Ttga tacttttagt
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     G G C C C     A
        G A        A      | + | | |     G
      T     T A C G       C T G G G     C
      G     | | | |                 T T
      G     A T G C
        T T        A     TTAC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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