The detailed information of tRNA gene sequence


Sequence ID>WENV170219744
Genome IDCEPZ01079157
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2381
End posion on genome 2456
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattcattta
tRNA gene sequence 
GGCAGGGTGGTGAAAGTGGTTATCATGTTCGTCTCATACGCGAAAGTTACAGGTTCAAGT
CCTGTCCCTGCTACCA
Downstream region at tRNA end position 
aaatattatg
Secondary structure (Cloverleaf model)
>WENV170219744	Met	CAT
                   a      ACCA aaatattatg
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      G A A        G      | | | | |     A
    T       A G T G       A C A G G     C
    G       | | | +                 T T
    G       T C A T
      T T A        G     AGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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