The detailed information of tRNA gene sequence


Sequence ID>WENV170219839
Genome IDCEPZ01083903
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1202
End posion on genome 1277
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
catcctctct
tRNA gene sequence 
GCGGGGGAAGTGTTACTGGAAACACGGCGGTCTCCAAAACCGCAAGTTGAGGGTTCGATC
CCCTCTCCCCGTGCCG
Downstream region at tRNA end position 
tctttagaaa
Secondary structure (Cloverleaf model)
>WENV170219839	Trp	CCA
                   t      GCCG tctttagaaa
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    A     C T C C C     A
      C A T        A      | | | | |     G
    T       T G T G       G A G G G     C
    G       | | | |                 T T
    G       A C A C
      A A          G     AAGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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