The detailed information of tRNA gene sequence


Sequence ID>WENV170220042
Genome IDCEPZ01088046
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3794
End posion on genome 3717
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttccaccaac
tRNA gene sequence 
CCCTTTGTGGTGTCAATGGTATAACATGGCGGACTCTTAATCCGTTCGATCCTGGTTCGA
ATCCAGGCAAGGGGACCA
Downstream region at tRNA end position 
gtagagatca
Secondary structure (Cloverleaf model)
>WENV170220042	Lys	CTT
                   c      ACCA gtagagatca
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A
                     T - A
                     G - C          T A
                    T     G G A C C     A
    T A A C        G      | | | | |     G
  G         T G T G       C C T G G     C
  G         | | | +                 T T
  T         A C A T
    A T A          G     TCGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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