The detailed information of tRNA gene sequence


Sequence ID>WENV170220049
Genome IDCEPZ01088046
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1445
End posion on genome 1368
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatagttaat
tRNA gene sequence 
CTGGGTGTGGGCAAGTCTGGAATGTCGCTCGGTTTGGAACCGAGAGTATCGCAGGTTCAA
ATCCTGCCACTCAGACCA
Downstream region at tRNA end position 
gaaacgtagt
Secondary structure (Cloverleaf model)
>WENV170220049	Pro	TGG
                   t      ACCA gaaacgtagt
                     C - G
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       A C G G       G C A G G     C
    T       | | + |                 T T
    G       T G T C
      G A A        G     AGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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