The detailed information of tRNA gene sequence


Sequence ID>WENV170220081
Genome IDCEPZ01088236
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2966
End posion on genome 2892
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttttttaaT
tRNA gene sequence 
CCTCTCGTAGCTCAGCGGTTAGAGCAGAAAACTCATAATTTTAAGGTCCCTGGTTCGAAT
CCAGGCGGGAGGATtc
Downstream region at tRNA end position 
gattacggac
Secondary structure (Cloverleaf model)
>WENV170220081	Met	CAT
                   T      ATtc gattacggac
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    G   A
                    A - T
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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