The detailed information of tRNA gene sequence


Sequence ID>WENV170220082
Genome IDCEPZ01088253
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2735
End posion on genome 2659
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttttattatT
tRNA gene sequence 
GGGTCCGTAGCTCAGTTTGGTGGTAGCACTTGGCTCTTAACCAAGGGGTCGTGGGTTCAA
ATCCCATCGGGCCCATat
Downstream region at tRNA end position 
ttttcatcaa
Secondary structure (Cloverleaf model)
>WENV170220082	Lys	CTT
                   T      ATat ttttcatcaa
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    T T G A        A      + | | | |     A
  T         C T C G       G T G G G     C
  G           | | |                 T T
  G         T A G C
    T G G          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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