The detailed information of tRNA gene sequence


Sequence ID>WENV170220108
Genome IDCEPZ01088389
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4354
End posion on genome 4426
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acttatgcgt
tRNA gene sequence 
AGGTCCGTGGTAGAATGGTATTGCGCCAGGCTGCAAACTTGGAGAATGCGAGTTCGAGTC
TCGTCGGACCTTCat
Downstream region at tRNA end position 
tttggcaact
Secondary structure (Cloverleaf model)
>WENV170220108	Cys	GCA
                   t      TCat tttggcaact
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
        A A        G      + | | | |     G
      T     G A T G       G C G A G     C
      G     + | + |                 T T
      G     T T G C
        T A        G     AGAAT
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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