The detailed information of tRNA gene sequence


Sequence ID>WENV170220239
Genome IDCEPZ01121808
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 384
End posion on genome 312
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attctatatT
tRNA gene sequence 
GGGCCCATAGTCCAATGGCAGAACACTTCGTTTGCAACGAAGAAACCCGTGTTCGATTCA
CGGTGGGTCCATat
Downstream region at tRNA end position 
aaatcttttc
Secondary structure (Cloverleaf model)
>WENV170220239	Ala	TGC
                   T      ATat aaatcttttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G C A C     A
        A A        A      | | | | |     G
      T     C C T G       C C G T G     C
      G     |   | |                 T T
      G     G A A C
        C A        A     AAAC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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