The detailed information of tRNA gene sequence


Sequence ID>WENV170220318
Genome IDCEPZ01142111
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 447
End posion on genome 375
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agataatata
tRNA gene sequence 
GGGTGCGTATTTCAACGGTTTAGAATTCCGGTCTCCAGAACCGGCGATGAGGGTTCGATT
CCCTCCGCGCCCAtcc
Downstream region at tRNA end position 
taaattcccc
Secondary structure (Cloverleaf model)
>WENV170220318	Trp	CCA
                   a      Atcc taaattcccc
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
      C A A        A      | | | | |     G
    G       C T T T       G A G G G     C
    G       | | |                   T T
    T       G A A T
      T T A        T     CGAT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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