The detailed information of tRNA gene sequence


Sequence ID>WENV170220351
Genome IDCEPZ01147935
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 441
End posion on genome 516
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acggtgcgat
tRNA gene sequence 
GGGGATGTAGCTCATTTGGGAGAGCATCTGCCTGGCAGGCAGAAGGTCACCGGTTCGACC
CCGGTCATCTCCACCA
Downstream region at tRNA end position 
atgttattat
Secondary structure (Cloverleaf model)
>WENV170220351	Ala	GGC
                   t      ACCA atgttattat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C C
                    T     T G G C C     A
      T T A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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