The detailed information of tRNA gene sequence


Sequence ID>WENV170220386
Genome IDCEPZ01153559
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 470
End posion on genome 397
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ataatattat
tRNA gene sequence 
CCCTCGTTAGCTTAACAGGAAAAGCAATCGTCTGAAAAGCGGTGTAATTTCGGTTCGAGT
CCGAAGTGAGGGACtt
Downstream region at tRNA end position 
atgtggtctg
Secondary structure (Cloverleaf model)
>WENV170220386	Phe	GAA
                   t      ACtt atgtggtctg
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G + T
                     T + G          T G
                    T     A A G C C     A
      C A A        A      | | | | |     G
    A       T T C G       T T C G G     C
    G       | | | |                 T T
    G       A A G C
      A A          A     GTAAT
                    A - T
                    T + G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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