The detailed information of tRNA gene sequence


Sequence ID>WENV170220637
Genome IDCEPZ01189141
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 904
End posion on genome 987
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcataagttc
tRNA gene sequence 
GCGGGGATGGCACAATCTGGTAATGCGCTAGCCTGCTAAGTTAGTTCCCTTTGGGTTTGA
GGGTTCAAATCCCTCTCCCCGCGCtc
Downstream region at tRNA end position 
atttgcattt
Secondary structure (Cloverleaf model)
>WENV170220637	Ser	GCT
                   c      GCtc atttgcattt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       C A C G       G A G G G     C
    T         | | |                 T T
    G       A T G C
      G T A        G     TTCCCTTTGGGTTT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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