The detailed information of tRNA gene sequence


Sequence ID>WENV170220820
Genome IDCEPZ01201314
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1547
End posion on genome 1619
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgtatactT
tRNA gene sequence 
GGGTGCGTCGTATACTGGTATTATGGTCGGCTCCAGCCCGGCAGAAGGGGGTTCGATTCC
CTCCGCGCCCATac
Downstream region at tRNA end position 
ctttaaattg
Secondary structure (Cloverleaf model)
>WENV170220820	Trp	CCA
                   T      ATac ctttaaattg
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        C A        C      | + | | |     G
      T     T A T G       G G G G G     C
      G       | | +                 T T
      G     T T A T
        T A        G     AGAA
                    G - C
                    T + G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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