The detailed information of tRNA gene sequence


Sequence ID>WENV170220824
Genome IDCEPZ01201503
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 487
End posion on genome 573
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tgtcccatta
tRNA gene sequence 
CCACTCGTGGCTGAGAGGCCGAAAGCACATGGCTTATAACCGTGCGTGGCGAAAGCCCCA
TCGTAGGTTCGAATCCTGCCGGGTGGAtta
Downstream region at tRNA end position 
aataaaggaa
Secondary structure (Cloverleaf model)
>WENV170220824	Ile	TAT
                   a      Atta aataaaggaa
                     C - G
                     C - G
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A G A        G      | + | | |     G
    G       G T C G       G T A G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CGTGGCGAAAGCCCCATC
                    C - G
                    A - T
                    T + G
                    G - C
                    G - C
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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