The detailed information of tRNA gene sequence


Sequence ID>WENV170220952
Genome IDCEPZ01207208
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1261
End posion on genome 1169
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgatattta
tRNA gene sequence 
GGAGAGTTGGTGGAGTCCGGTTTAACACACCTGTCTTGAAAACAGGAGGCTGCCCGTAGG
GTGGTCCATGGGTTCGAATCCCATACTCTCCTCtt
Downstream region at tRNA end position 
tgagtgattt
Secondary structure (Cloverleaf model)
>WENV170220952	Ser	TGA
                   a      TCtt tgagtgattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C C C     A
    C T G A        G      | | | | |     G
  C         G G T G       A T G G G     C
  G           | | |                 T T
  G         A C A C
    T T T A        A     AGGCTGCCCGTAGGGTGGTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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