The detailed information of tRNA gene sequence


Sequence ID>WENV170220968
Genome IDCEPZ01207539
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2243
End posion on genome 2169
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttactacaG
tRNA gene sequence 
GGGCTCATGGCCAAATCTGGTAAGGCAATCGCCTGCAGAGCGATGATTCTGGGTTCAAAT
CCCAGTGGGCCCTAtt
Downstream region at tRNA end position 
atattcctat
Secondary structure (Cloverleaf model)
>WENV170220968	Cys	GCA
                   G      TAtt atattcctat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     G A C C C     A
      T A A        G      | | | | |     A
    C       A C C G       C T G G G     C
    T         | | |                 T T
    G       A G G C
      G T A        A     GATT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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