The detailed information of tRNA gene sequence


Sequence ID>WENV170221001
Genome IDCEPZ01208394
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2267
End posion on genome 2196
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cccatatatg
tRNA gene sequence 
GCGGTTGTAGTATAGTGGTAGTACGTCAGCCTGTGGCGCTGAAAGGGAGAGTTCGATCCT
CTCCTTCCGCCCtc
Downstream region at tRNA end position 
tctgttcgcc
Secondary structure (Cloverleaf model)
>WENV170221001	His	GTG
                   g      CCtc tctgttcgcc
                     G - C
                     C - G
                     G - C
                     G - C
                     T   T
                     T   T
                     G - C          C T
                    T     C T C T C     A
        G A        A      | | | | |     G
      T     T A T G       G A G A G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     AAGG
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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