The detailed information of tRNA gene sequence


Sequence ID>WENV170221004
Genome IDCEPZ01208463
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3582
End posion on genome 3654
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatcattga
tRNA gene sequence 
GGGGGTATAGCTCAATCTGGTAGAGTAACCGGCTCCAGACCGGTTGATCTGGGTTCAAAT
CCTGGTGCCCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170221004	Trp	CCA
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G T C C     A
      T A A        A      | + + | |     A
    C       C T C G       C T G G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     TGAT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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