The detailed information of tRNA gene sequence


Sequence ID>WENV170221121
Genome IDCEPZ01209637
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1041
End posion on genome 967
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaacaacat
tRNA gene sequence 
GGGCCGGTAGCTCAGTCTGGCAGAGCACCTGTTTTGCAAATAGGAAGCCAAGGGTTCAAA
TCCCTTTCGGTCCACtc
Downstream region at tRNA end position 
actttagggt
Secondary structure (Cloverleaf model)
>WENV170221121	Ala	TGC
                   t      ACtc actttagggt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       A A G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     AAGCC
                    C - G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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