The detailed information of tRNA gene sequence


Sequence ID>WENV170221323
Genome IDCEQA01082668
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 170
End posion on genome 243
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaattttcT
tRNA gene sequence 
GATCCTTTCGTCTAACGGCAAGGACGCTACCCTGTCACGGTAGTAATGCGGGTTCAATTC
CCGCAAGGATCGTtg
Downstream region at tRNA end position 
gcacatttta
Secondary structure (Cloverleaf model)
>WENV170221323	Asp	GTC
                   T      GTtg gcacatttta
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          T T
                    T     C G C C C     A
      C A A        C      | | | | |     A
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      A A          G     TAAT
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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