The detailed information of tRNA gene sequence


Sequence ID>WENV170221515
Genome IDCEQB01021682
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1892
End posion on genome 1818
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtacgaaat
tRNA gene sequence 
GGTCCGGTAGCTTAAAGGTAAAGCACTCGGCTCATAACCGATCGCATCTGGGTTCAATTC
CTAGCCGGACTACCA
Downstream region at tRNA end position 
caacctagga
Secondary structure (Cloverleaf model)
>WENV170221515	Met	CAT
                   t      ACCA caacctagga
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     G A T C C     A
        A A        A      | | + | |     A
      A     T T C G       C T G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        A     CGCAT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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