The detailed information of tRNA gene sequence


Sequence ID>WENV170221531
Genome IDCEQB01029537
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2255
End posion on genome 2179
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaagtgggcc
tRNA gene sequence 
GAGTCGGTGCCGGAGTGGTTCAACGGGGCGGATTGCAAATCCGTTATTCGTGGGTTCGAA
TCCCACCCGGCTCTCAA
Downstream region at tRNA end position 
ttaaagaagc
Secondary structure (Cloverleaf model)
>WENV170221531	Cys	GCA
                   c      TCAA ttaaagaagc
                     G - C
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T C A        G     TATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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