The detailed information of tRNA gene sequence


Sequence ID>WENV170221542
Genome IDCEQB01033199
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 202
End posion on genome 278
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaactat
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTTGTCGTGGGTTCAAA
TCCTACCAAGCCTACTA
Downstream region at tRNA end position 
cctttaatgg
Secondary structure (Cloverleaf model)
>WENV170221542	Met	CAT
                   t      ACTA cctttaatgg
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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