The detailed information of tRNA gene sequence


Sequence ID>WENV170221613
Genome IDCEQB01061700
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 188
End posion on genome 262
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaactaagc
tRNA gene sequence 
AGGTGATTAGTGTAATGGTTAGCACGATAGTCTCCAAAACTATTAGTAGAAGTTCGAATC
TTCTATCACCTGCCA
Downstream region at tRNA end position 
actctaagga
Secondary structure (Cloverleaf model)
>WENV170221613	Trp	CCA
                   c      GCCA actctaagga
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T T C     A
      T A A        A      | | | | |     G
    G       T G T G       A G A A G     C
    G       + | | |                 T T
    T       G C A C
      T A          G     TAGT
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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