The detailed information of tRNA gene sequence


Sequence ID>WENV170221938
Genome IDCEQC01033683
Search identical group
Phylum/Class[CEQC] marine metagenome genome assembly TARA_076_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 521
End posion on genome 596
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttctctcgt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGAGGGTTCAAGT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
gagcggtgtt
Secondary structure (Cloverleaf model)
>WENV170221938	Trp	CCA
                   t      GCCA gagcggtgtt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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