The detailed information of tRNA gene sequence


Sequence ID>WENV170222613
Genome IDCEQD01046169
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 244
End posion on genome 155
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggagtacac
tRNA gene sequence 
GGAGACGTGGCCGAGCCAGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGTCGTAAGGC
GTTCGTGGGTTCAAATCCCACCGTCTCCGCtc
Downstream region at tRNA end position 
agtcgacacg
Secondary structure (Cloverleaf model)
>WENV170222613	Ser	GCT
                   c      GCtc agtcgacacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGTCGTAAGGCGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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