The detailed information of tRNA gene sequence


Sequence ID>WENV170223089
Genome IDCEQD01103351
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 215
End posion on genome 287
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttctattt
tRNA gene sequence 
TCCTCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC
CCCGTCGAGGAGCtt
Downstream region at tRNA end position 
tttagtcccg
Secondary structure (Cloverleaf model)
>WENV170223089	Asp	GTC
                   t      GCtt tttagtcccg
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     G C C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C G G G G     C
    G       + | | +                 T T
    C       G T A T
      T A          C     AGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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