The detailed information of tRNA gene sequence


Sequence ID>WENV170223246
Genome IDCEQD01122331
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 448
End posion on genome 537
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaatattt
tRNA gene sequence 
GGAGATGTGTGTGAGTGGTTTAAACAGCACGCTTGGAAAGTGTGTGTACTTTAACGAGTA
CCGTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
taataattac
Secondary structure (Cloverleaf model)
>WENV170223246	Ser	GGA
                   t      GCCA taataattac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T G T       G T G G G     C
    G         | | |                 T T
    T       A A C A
      T T A        G     TGTACTTTAACGAGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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