The detailed information of tRNA gene sequence


Sequence ID>WENV170223265
Genome IDCEQD01124711
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 322
End posion on genome 396
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cattaaataa
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGCTAGAGCGCTTGACTGGCAGTCAAGAGGTCGGCGGTTCGAG
CCCGCTCTTCTCCACtt
Downstream region at tRNA end position 
acctagatca
Secondary structure (Cloverleaf model)
>WENV170223265	Ala	GGC
                   a      ACtt acctagatca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T   T
                     G - C          C G
                    T     T C G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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