The detailed information of tRNA gene sequence


Sequence ID>WENV170223304
Genome IDCEQD01128378
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 814
End posion on genome 890
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcggaattt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTACACTGGGGGTGTAGTGGTCGCAGGTTCAAA
TCCTGCCGTCCCGACCA
Downstream region at tRNA end position 
tgatttttat
Secondary structure (Cloverleaf model)
>WENV170223304	Pro	GGG
                   t      ACCA tgatttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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