The detailed information of tRNA gene sequence


Sequence ID>WENV170223432
Genome IDCEQD01143519
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 94
End posion on genome 8
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttttctgttt
tRNA gene sequence 
GGGGGGTTGTTGGAACTGGCAGACAAGTTGGACTCAAAATCCAATGGTAGCAATACCGTG
AGGGTTCAAGTCCCTCACCCCCTACCA
Downstream region at tRNA end position 
attaaatnnn
Secondary structure (Cloverleaf model)
>WENV170223432	Leu	CAA
                   t      ACCA attaaatnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C T C C C     A
      C A A        G      | | | | |     A
    T       G G T T       G A G G G     C
    G         | | |                 T T
    G       A C A A
      C A G        G     TGGTAGCAATACCGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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