The detailed information of tRNA gene sequence


Sequence ID>WENV170223436
Genome IDCEQD01145242
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 477
End posion on genome 406
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgagtcacga
tRNA gene sequence 
GGCCGAATGGCGCAATGGTAACGCGACAGATTCCAGTCCTGTAGATTGGGGGTTCAATTC
CCTCTTCGGTCAttt
Downstream region at tRNA end position 
ttttttccgt
Secondary structure (Cloverleaf model)
>WENV170223436	Trp	CCA
                   a      Attt ttttttccgt
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T          T T
                    T     C T C C C     A
        A A        G      | + | | |     A
      T     C G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        T A        G     AGATT
                    A - T
                    C - G
                    A - T
                    G - C
                    A   C
                  T       T
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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