The detailed information of tRNA gene sequence


Sequence ID>WENV170223464
Genome IDCEQD01160516
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 456
End posion on genome 532
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttatttttat
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGCAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCAAA
TCCTACCATCCCGACCA
Downstream region at tRNA end position 
atcggctann
Secondary structure (Cloverleaf model)
>WENV170223464	Pro	TGG
                   t      ACCA atcggctann
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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