The detailed information of tRNA gene sequence


Sequence ID>WENV170223558
Genome IDCEQD01207454
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 93
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCTGGTTTGCTAAACCGGTGAAGGGCTAATCGTC
CTTCCACGGGTTCGAATCCCGTTCTCTCCGCCA
Downstream region at tRNA end position 
cttttaattt
Secondary structure (Cloverleaf model)
>WENV170223558	Ser	GCT
                   n      GCCA cttttaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A C G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAAGGGCTAATCGTCCTTCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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