The detailed information of tRNA gene sequence


Sequence ID>WENV170223655
Genome IDCEQD01245545
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1100
End posion on genome 1173
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaatggttga
tRNA gene sequence 
ATGGGTGTGGTGTAACGGTAACACGACGGTCTCCAAAACCGTAGATGAGGGTTCAATTCC
TTCCACCTATGCCA
Downstream region at tRNA end position 
tttcaagtgg
Secondary structure (Cloverleaf model)
>WENV170223655	Trp	CCA
                   a      GCCA tttcaagtgg
                     A - T
                     T - A
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T T C C     A
        A A        G      | | + | |     A
      C     T G T G       G A G G G     C
      G     | | | |                 T T
      G     A C A C
        T A        G     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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