The detailed information of tRNA gene sequence


Sequence ID>WENV170223867
Genome IDCEQE01010176
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 211
End posion on genome 140
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagggaaagt
tRNA gene sequence 
GCGGAGGTGGCACAATGGTACTGCATTCGGTTGCAGCCCGGATTTTCGTGGGTTCGATTC
CCACCCTCCGCTtat
Downstream region at tRNA end position 
tctcttgtag
Secondary structure (Cloverleaf model)
>WENV170223867	Cys	GCA
                   t      Ttat tctcttgtag
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C A C C C     A
        A A        G      | | | | |     G
      T     C A C G       G T G G G     C
      G       | | |                 T T
      G     C T G C
        T A        A     TTTTC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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