The detailed information of tRNA gene sequence


Sequence ID>WENV170223993
Genome IDCEQE01020384
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 294
End posion on genome 220
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaactctatt
tRNA gene sequence 
GGCGTCGTACCCAAGCGGTCTAAGGGAACGGTTTGCAAAACCGTCTTTCGTCGGTTCGAA
TCCGACCGACGCCTCac
Downstream region at tRNA end position 
ttatttattt
Secondary structure (Cloverleaf model)
>WENV170223993	Cys	GCA
                   t      TCac ttatttattt
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A G C C     A
      C G A        A      | | | | |     G
    G       A C C C       G T C G G     C
    G         | | |                 T T
    T       A G G G
      C T A        A     CTTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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