The detailed information of tRNA gene sequence


Sequence ID>WENV170224075
Genome IDCEQE01025480
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 835
End posion on genome 926
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taaatggtgA
tRNA gene sequence 
GGAGGGGAAGCAGTCCCGGTGGGCTGGCCGGTCTTCAAAACCGGTGAAGGGCGTCAGACG
CTCTTAGTAGGTTCGACTCCTACTCTCTTCCgcc
Downstream region at tRNA end position 
aactcttccg
Secondary structure (Cloverleaf model)
>WENV170224075	SeC(p)	TCA
                   A      Cgcc aactcttccg
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     G - C
                     G + T          T C
                    A     C A T C C     A
    C C C T        A      | | | | |     G
  G         G A C G       G T A G G     C
  G         +   | |                 T T
  T         T G G C
    G G G C        C     AAGGGCGTCAGACGCTCTTA
                    G   G
                    G + T
                    T + G
                    C - G
                    T   C
                  T       C
                  C       A
                    A A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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