The detailed information of tRNA gene sequence


Sequence ID>WENV170224445
Genome IDCEQE01055370
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 823
End posion on genome 914
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataacactat
tRNA gene sequence 
GGTGGGTTGACAGAGTCTGGCTTATTGTACTTGTCTTGAAAACAAGCGTGCCTTTATCGG
CACCGAAGGTTCGAATCCTTCACCCACCGCCA
Downstream region at tRNA end position 
ttttatttgg
Secondary structure (Cloverleaf model)
>WENV170224445	Ser	TGA
                   t      GCCA ttttatttgg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T T C C     A
    C T G A        G      | | | | |     G
  T         G A C A       G A A G G     C
  G         + | | |                 T T
  G         T T G T
    C T T A        A     CGTGCCTTTATCGGCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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