The detailed information of tRNA gene sequence


Sequence ID>WENV170225383
Genome IDCEQE01133216
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 412
End posion on genome 504
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgttgttta
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGCCGATTAGGCACGACTGGAAATCGTGTGTTCTCTCACAAGGG
GAACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
acatgcctga
Secondary structure (Cloverleaf model)
>WENV170225383	Ser	GGA
                   a      GCCA acatgcctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G       + | | |                 T T
    C       T T A G
      C G A        G     TGTTCTCTCACAAGGGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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