The detailed information of tRNA gene sequence


Sequence ID>WENV170225399
Genome IDCEQE01134622
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 911
End posion on genome 1006
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atagacatct
tRNA gene sequence 
GGAAGGGGATCGCACCCCGGTGGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGCCAAGC
GTGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
attccccaac
Secondary structure (Cloverleaf model)
>WENV170225399	SeC(p)	TCA
                   t      GCCA attccccaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGGGGCGCCAAGCGTGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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