The detailed information of tRNA gene sequence


Sequence ID>WENV170225816
Genome IDCEQE01155590
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 237
End posion on genome 161
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaaaagt
tRNA gene sequence 
GGTGATGTAGCTCAGGCGGTCAGAGCGACGGATTCATAATCCGTAGGTCGGTGGTTCAAG
TCCACCCATCACCACCA
Downstream region at tRNA end position 
tttatcaacg
Secondary structure (Cloverleaf model)
>WENV170225816	Met	CAT
                   t      ACCA tttatcaacg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C C A C C     A
      G G A        A      | | | | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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