The detailed information of tRNA gene sequence


Sequence ID>WENV170225827
Genome IDCEQE01161273
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 118
End posion on genome 44
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtttataT
tRNA gene sequence 
GCCTCCATAGCTCAGTTGGTAGAGTGCAGGTTTCATGAGCCTGAGGTCGTGGGTTCGATC
CCCACTGGAGGCATta
Downstream region at tRNA end position 
atcaccatag
Secondary structure (Cloverleaf model)
>WENV170225827	Met	CAT
                   T      ATta atcaccatag
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          C T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  T       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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