The detailed information of tRNA gene sequence


Sequence ID>WENV170225830
Genome IDCEQE01162659
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 96
End posion on genome 172
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gtcgtctttt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCACACTGGGGGTGTGGAGGTCGTGGGTTCAAA
TCCCACCGCTCCGACCA
Downstream region at tRNA end position 
ttttcttccc
Secondary structure (Cloverleaf model)
>WENV170225830	Pro	GGG
                   t      ACCA ttttcttccc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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