The detailed information of tRNA gene sequence


Sequence ID>WENV170225903
Genome IDCEQE01190178
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 218
End posion on genome 292
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gttagaatta
tRNA gene sequence 
GGGCCGGTGGTCTAGTCTGGTTATGACATCGCTCTCACACAGCGGGGGTCGACGGTTCAA
ATCCGCCCCGGCCCAtac
Downstream region at tRNA end position 
atgattatca
Secondary structure (Cloverleaf model)
>WENV170225903	Val	CAC
                   a      Atac atgattatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C C G C C     A
    C T G A        G      |   | | |     A
  T         T C T G       G A C G G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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